Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 chromosome, complete genome.
Gene Summary
Adenine Count
840661 bp
Thymine Count
837797 bp
Guanine Count
1541588 bp
Cytosine Count
1546375 bp
Genome Length
4766421 bp
Protein-coding Genes
4410 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | TZ53_RS25405 | Not Available | Negative | 1735 - 4683 | 108750.0 |
| recombinase family protein | TZ53_RS25410 | Not Available | Positive | 4812 - 5405 | 21960.6 |
| hypothetical protein | TZ53_RS25415 | Not Available | Positive | 5402 - 6763 | 50275.4 |
| recombinase family protein | TZ53_RS25420 | Not Available | Positive | 7095 - 7961 | 32295.8 |
| cell division protein zapb | TZ53_RS25425 | Not Available | Positive | 8333 - 8767 | 15804.5 |
| recombinase family protein | TZ53_RS25430 | Not Available | Negative | 8783 - 9331 | 19663.6 |
| noti family restriction endonuclease | TZ53_RS25435 | Not Available | Negative | 9426 - 10361 | 35085.8 |
| dna cytosine methyltransferase | TZ53_RS25440 | Not Available | Negative | 10351 - 11502 | 42155.7 |
| copg family transcriptional regulator | TZ53_RS26540 | Not Available | Negative | 11517 - 11753 | 8665.49 |
| hypothetical protein | TZ53_RS25445 | Not Available | Positive | 11870 - 12160 | 10268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
