Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein | TZ53_RS02840 | Not Available | Negative | 579152 - 580225 | 38976.1 |
| mbl fold metallo-hydrolase | TZ53_RS02845 | Not Available | Negative | 580265 - 581269 | 35892.2 |
| iclr family transcriptional regulator c-terminal domain-containing protein | TZ53_RS25900 | Not Available | Negative | 581564 - 582721 | 41337.4 |
| hypothetical protein | TZ53_RS02855 | Not Available | Positive | 583066 - 584160 | 39737.0 |
| laci family dna-binding transcriptional regulator | TZ53_RS02860 | Not Available | Positive | 584466 - 585560 | 39492.5 |
| Trna-glu | Not Available | Not Available | Positive | 585754 - 585829 | Not Available |
| single-stranded-dna-specific exonuclease recj | TZ53_RS02870 | Not Available | Negative | 585951 - 587717 | 61627.3 |
| autotransporter assembly complex protein tama | TZ53_RS02875 | Not Available | Positive | 587855 - 589945 | 74866.0 |
| translocation/assembly module tamb domain-containing protein | TZ53_RS02880 | Not Available | Positive | 589945 - 594132 | 147088.0 |
| recombinase reca | TZ53_RS02885 | Not Available | Negative | 594566 - 595639 | 38330.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
