Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | TZ53_RS02790 | Not Available | Positive | 571927 - 572460 | 18500.5 |
| dienelactone hydrolase family protein | TZ53_RS02795 | Not Available | Negative | 572572 - 573471 | 32050.0 |
| gamma-glutamylcyclotransferase | TZ53_RS02800 | Not Available | Negative | 573645 - 573974 | 11871.9 |
| pspc domain-containing protein | TZ53_RS02805 | Not Available | Positive | 574357 - 574542 | 6417.1 |
| duf72 domain-containing protein | TZ53_RS02810 | Not Available | Negative | 574848 - 575588 | 27236.4 |
| duf2061 domain-containing protein | TZ53_RS02815 | Not Available | Positive | 575705 - 575941 | 8502.41 |
| nuclear transport factor 2 family protein | TZ53_RS25520 | Not Available | Negative | 576003 - 576374 | 13871.4 |
| rida family protein | TZ53_RS02825 | Not Available | Negative | 576416 - 576895 | 17211.5 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | TZ53_RS02830 | Not Available | Negative | 577296 - 578108 | 28511.5 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein | TZ53_RS02835 | Not Available | Negative | 578136 - 579020 | 33495.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
