Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | TZ53_RS02340 | Not Available | Positive | 487563 - 488165 | 21368.9 |
| adenine phosphoribosyltransferase | TZ53_RS02345 | Not Available | Negative | 488299 - 488835 | 18338.4 |
| cytochrome c1 | TZ53_RS02350 | Not Available | Negative | 488904 - 489752 | 30998.1 |
| cytochrome b | TZ53_RS02355 | Not Available | Negative | 489767 - 491086 | 48970.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | TZ53_RS02360 | Not Available | Negative | 491098 - 491679 | 20418.2 |
| trna (cytidine(34)-2'-o)-methyltransferase | TZ53_RS02365 | Not Available | Positive | 491872 - 492342 | 16966.7 |
| oxygen-dependent coproporphyrinogen oxidase | TZ53_RS02370 | Not Available | Positive | 492357 - 493208 | 31551.0 |
| gnat family n-acetyltransferase | TZ53_RS02375 | Not Available | Positive | 493211 - 493810 | 22139.0 |
| hypothetical protein | TZ53_RS02380 | Not Available | Negative | 493792 - 494580 | 27040.5 |
| lipoyl(octanoyl) transferase lipb | TZ53_RS02385 | Not Available | Positive | 494666 - 495385 | 25889.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
