Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | TZ53_RS27435 | Not Available | Negative | 476559 - 476920 | 13522.1 |
| hypothetical protein | TZ53_RS26620 | Not Available | Positive | 477240 - 478373 | 41878.4 |
| hypothetical protein | TZ53_RS02300 | Not Available | Positive | 478604 - 479341 | 27925.1 |
| gdp-mannose 4,6-dehydratase | TZ53_RS02305 | Not Available | Positive | 479432 - 480466 | 38556.1 |
| gdp-mannose 4,6-dehydratase | TZ53_RS02310 | Not Available | Positive | 480563 - 481459 | 32432.2 |
| phosphatase pap2 family protein | TZ53_RS25895 | Not Available | Positive | 481752 - 482184 | 15611.3 |
| gh92 family glycosyl hydrolase | TZ53_RS02320 | Not Available | Negative | 482609 - 484939 | 85102.1 |
| rok family protein | TZ53_RS02325 | Not Available | Positive | 485180 - 486085 | 30930.5 |
| hypothetical protein | TZ53_RS02330 | Not Available | Negative | 486078 - 486338 | 9367.93 |
| class i mannose-6-phosphate isomerase | TZ53_RS02335 | Not Available | Positive | 486704 - 487522 | 29535.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
