Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | TZ53_RS02210 | Not Available | Negative | 455183 - 455830 | 24151.3 |
| abc transporter permease | TZ53_RS02215 | Not Available | Negative | 455827 - 456624 | 29951.8 |
| capsule biosynthesis protein | TZ53_RS02220 | Not Available | Negative | 456627 - 457790 | 42735.2 |
| polysaccharide biosynthesis/export family protein | TZ53_RS02225 | Not Available | Positive | 457968 - 459113 | 40019.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | TZ53_RS25870 | Not Available | Positive | 459274 - 459459 | 6987.38 |
| phosphatase pap2 family protein | TZ53_RS27430 | Not Available | Positive | 459544 - 459702 | 6047.26 |
| phosphatase pap2 family protein | TZ53_RS25880 | Not Available | Positive | 459723 - 460125 | 14202.1 |
| is66 family transposase | TZ53_RS02240 | Not Available | Negative | 460167 - 461780 | 60248.2 |
| is66 family insertion sequence element accessory protein tnpb | TZ53_RS02245 | Not Available | Negative | 461840 - 462121 | 10499.8 |
| transposase | TZ53_RS02250 | Not Available | Negative | 462184 - 462513 | 11940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
