Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | TZ53_RS02170 | Not Available | Positive | 443325 - 443876 | 19893.6 |
| benenodin family lasso peptide | TZ53_RS26595 | Not Available | Positive | 444042 - 444161 | 3978.51 |
| lasso peptide biosynthesis b2 protein | TZ53_RS25505 | Not Available | Positive | 444214 - 444870 | 24552.9 |
| asparagine synthetase b family protein | TZ53_RS02180 | Not Available | Positive | 444870 - 446621 | 63025.3 |
| atxe2 family lasso peptide isopeptidase | TZ53_RS02185 | Not Available | Negative | 446618 - 448723 | 77019.2 |
| tonb-dependent receptor | TZ53_RS02190 | Not Available | Negative | 448729 - 451299 | 90376.5 |
| fecr family protein | TZ53_RS02195 | Not Available | Negative | 451377 - 452384 | 36273.6 |
| rna polymerase sigma factor | TZ53_RS02200 | Not Available | Negative | 452377 - 452958 | 21712.9 |
| hypothetical protein | TZ53_RS26600 | Not Available | Positive | 453694 - 453888 | 6968.69 |
| tyrosine-type recombinase/integrase | TZ53_RS02205 | Not Available | Positive | 454022 - 455164 | 43053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
