Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | TZ53_RS02115 | Not Available | Negative | 436038 - 436667 | 22579.4 |
| s26 family signal peptidase | TZ53_RS02120 | Not Available | Negative | 436655 - 437227 | 21011.1 |
| helix-turn-helix domain-containing protein | TZ53_RS02125 | Not Available | Negative | 437224 - 437481 | 9487.22 |
| duf736 domain-containing protein | TZ53_RS02130 | Not Available | Negative | 437657 - 437977 | 11439.4 |
| duf2285 domain-containing protein | TZ53_RS25500 | Not Available | Negative | 438500 - 439153 | 24411.8 |
| autoinducer binding domain-containing protein | TZ53_RS02145 | Not Available | Positive | 439526 - 439933 | 14957.0 |
| is256 family transposase | TZ53_RS02150 | Not Available | Positive | 440069 - 441280 | 45105.6 |
| helix-turn-helix transcriptional regulator | TZ53_RS02155 | Not Available | Positive | 441283 - 441726 | 16458.5 |
| acyl-homoserine-lactone synthase | TZ53_RS27815 | Not Available | Positive | 441995 - 442381 | 14534.5 |
| phytanoyl-coa dioxygenase family protein | TZ53_RS02165 | Not Available | Positive | 442398 - 443264 | 31090.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
