Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb3 family type iv secretion system protein | TZ53_RS02065 | Not Available | Negative | 420279 - 420539 | 9009.18 |
| trbc/virb2 family protein | TZ53_RS02070 | Not Available | Negative | 420536 - 420883 | 11635.4 |
| p-type conjugative transfer atpase trbb | TZ53_RS02075 | Not Available | Negative | 420880 - 421836 | 33645.8 |
| hypothetical protein | TZ53_RS02080 | Not Available | Negative | 421899 - 422315 | 15258.4 |
| conjugal transfer protein trag | TZ53_RS02085 | Not Available | Negative | 422312 - 424333 | 74750.7 |
| hepn domain-containing protein | TZ53_RS02090 | Not Available | Negative | 424479 - 425399 | 35117.7 |
| copg family ribbon-helix-helix protein | TZ53_RS27425 | Not Available | Positive | 425682 - 425849 | 6086.03 |
| relaxase/mobilization nuclease rlxs | TZ53_RS02100 | Not Available | Negative | 425987 - 427999 | 74211.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | TZ53_RS02105 | Not Available | Positive | 428640 - 435311 | 222973.0 |
| phosphatase pap2 family protein | TZ53_RS02110 | Not Available | Positive | 435368 - 435642 | 9459.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
