Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | TZ53_RS25860 | Not Available | Positive | 409973 - 410416 | 16286.3 |
| fkbm family methyltransferase | TZ53_RS25495 | Not Available | Positive | 410400 - 411476 | 39562.3 |
| class i sam-dependent methyltransferase | TZ53_RS25865 | Not Available | Negative | 411520 - 412413 | 34024.5 |
| duf2274 domain-containing protein | TZ53_RS02030 | Not Available | Negative | 412540 - 412764 | 8363.24 |
| trbi/virb10 family protein | TZ53_RS02035 | Not Available | Negative | 412774 - 414036 | 44469.1 |
| p-type conjugative transfer protein trbg | TZ53_RS02040 | Not Available | Negative | 414033 - 414890 | 31375.5 |
| conjugal transfer protein trbf | TZ53_RS02045 | Not Available | Negative | 414887 - 415660 | 28903.1 |
| p-type conjugative transfer protein trbl | TZ53_RS02050 | Not Available | Negative | 415662 - 416957 | 43928.3 |
| p-type conjugative transfer protein trbj | TZ53_RS02055 | Not Available | Negative | 417084 - 417833 | 27180.5 |
| conjugal transfer protein trbe | TZ53_RS02060 | Not Available | Negative | 417835 - 420285 | 89683.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
