Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein b | TZ53_RS25490 | Not Available | Negative | 398247 - 398984 | 26092.3 |
| hypothetical protein | TZ53_RS01975 | Not Available | Positive | 399469 - 400962 | 55347.9 |
| glucose-1-phosphate cytidylyltransferase | TZ53_RS01980 | Not Available | Positive | 401086 - 401853 | 28367.9 |
| cdp-glucose 4,6-dehydratase | TZ53_RS01985 | Not Available | Positive | 401847 - 402929 | 40044.4 |
| lipopolysaccharide biosynthesis protein rfbh | TZ53_RS01990 | Not Available | Positive | 402926 - 404293 | 50498.0 |
| n-acetylneuraminate synthase family protein | TZ53_RS01995 | Not Available | Positive | 404305 - 405450 | 42533.9 |
| thiamine pyrophosphate-binding protein | TZ53_RS02000 | Not Available | Positive | 405521 - 407359 | 66568.0 |
| had family hydrolase | TZ53_RS02005 | Not Available | Positive | 407359 - 408042 | 24786.6 |
| nad-dependent epimerase/dehydratase family protein | TZ53_RS02010 | Not Available | Positive | 408058 - 409029 | 35602.4 |
| glycosyltransferase family 2 protein | TZ53_RS02015 | Not Available | Positive | 409022 - 409969 | 34769.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
