Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase rna specificity domain-containing protein | TZ53_RS22535 | Not Available | Negative | 36717 - 38165 | 52716.1 |
| duf2933 domain-containing protein | TZ53_RS22540 | Not Available | Positive | 38418 - 38681 | 9646.93 |
| transposase | TZ53_RS22545 | Not Available | Positive | 38678 - 39340 | 25612.5 |
| hypothetical protein | TZ53_RS26335 | Not Available | Negative | 39467 - 40036 | 20591.9 |
| helix-turn-helix transcriptional regulator | TZ53_RS22555 | Not Available | Positive | 40258 - 41019 | 28478.9 |
| luxr family transcriptional regulator | TZ53_RS22560 | Not Available | Positive | 41102 - 41779 | 24930.8 |
| acyl-homoserine-lactone synthase | TZ53_RS22565 | Not Available | Positive | 41854 - 42465 | 23082.7 |
| phytanoyl-coa dioxygenase family protein | TZ53_RS22570 | Not Available | Positive | 42477 - 43409 | 33750.1 |
| hypothetical protein | TZ53_RS22575 | Not Available | Positive | 43473 - 43811 | 11821.3 |
| lytic transglycosylase domain-containing protein | TZ53_RS22580 | Not Available | Positive | 43808 - 44473 | 22561.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
