Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe/urej family protein | TZ53_RS01875 | Not Available | Positive | 378920 - 379624 | 25244.5 |
| hypothetical protein | TZ53_RS01880 | Not Available | Positive | 379621 - 380229 | 21507.4 |
| ornithine cyclodeaminase family protein | TZ53_RS01885 | Not Available | Positive | 380255 - 381247 | 34954.8 |
| haloacid dehalogenase type ii | TZ53_RS01890 | Not Available | Positive | 381481 - 382149 | 25131.0 |
| cupin domain-containing protein | TZ53_RS01895 | Not Available | Positive | 382155 - 382856 | 25045.5 |
| gnat family n-acetyltransferase | TZ53_RS01900 | Not Available | Positive | 383048 - 383908 | 30835.0 |
| alanine racemase | TZ53_RS01905 | Not Available | Positive | 383922 - 385097 | 41172.2 |
| fad-binding oxidoreductase | TZ53_RS01910 | Not Available | Positive | 385135 - 385752 | 22169.7 |
| aldehyde dehydrogenase family protein | TZ53_RS01915 | Not Available | Positive | 385749 - 387209 | 50998.6 |
| nad(p)/fad-dependent oxidoreductase | TZ53_RS01920 | Not Available | Positive | 387250 - 388563 | 47108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
