Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | TZ53_RS01685 | Not Available | Positive | 343208 - 343555 | 13294.9 |
| type ii toxin-antitoxin system hipa family toxin | TZ53_RS01690 | Not Available | Positive | 343556 - 344863 | 47089.6 |
| tyrosine-type recombinase/integrase | TZ53_RS26585 | Not Available | Positive | 344860 - 345048 | 7443.07 |
| haloacid dehalogenase type ii | TZ53_RS01700 | Not Available | Negative | 345338 - 346006 | 24899.5 |
| dihydroxy-acid dehydratase | TZ53_RS01705 | Not Available | Positive | 346207 - 347976 | 63534.5 |
| 2-hydroxyacid dehydrogenase | TZ53_RS01710 | Not Available | Positive | 347977 - 348903 | 34068.9 |
| nad(p)/fad-dependent oxidoreductase | TZ53_RS01715 | Not Available | Negative | 349063 - 350385 | 47809.1 |
| hypothetical protein | TZ53_RS25485 | Not Available | Negative | 351210 - 351737 | 19181.0 |
| hypothetical protein | TZ53_RS01725 | Not Available | Negative | 351734 - 352168 | 15404.2 |
| hypothetical protein | TZ53_RS01730 | Not Available | Negative | 352195 - 352578 | 13659.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
