Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease domain-containing protein | TZ53_RS01540 | Not Available | Negative | 312049 - 312492 | 16340.3 |
| abc transporter atp-binding protein | TZ53_RS01545 | Not Available | Negative | 312489 - 313418 | 33890.8 |
| phosphoribosylglycinamide formyltransferase | TZ53_RS01550 | Not Available | Negative | 313464 - 314366 | 33022.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | TZ53_RS01555 | Not Available | Negative | 314499 - 315593 | 37885.3 |
| hypothetical protein | TZ53_RS01560 | Not Available | Positive | 315746 - 317029 | 45470.3 |
| chromosomal replication initiator protein dnaa | TZ53_RS01565 | Not Available | Positive | 317038 - 317652 | 22178.4 |
| rna degradosome polyphosphate kinase | TZ53_RS01570 | Not Available | Positive | 317681 - 319819 | 80033.9 |
| ppx/gppa family phosphatase | TZ53_RS01575 | Not Available | Positive | 319825 - 321339 | 54624.4 |
| dsre family protein | TZ53_RS01580 | Not Available | Negative | 321537 - 321902 | 12335.2 |
| hesa/moeb/thif family protein | TZ53_RS01585 | Not Available | Negative | 321890 - 322666 | 26725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
