Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase-like activity of phytase family protein | TZ53_RS01490 | Not Available | Negative | 299898 - 300890 | 36628.3 |
| glycine zipper 2tm domain-containing protein | TZ53_RS01495 | Not Available | Positive | 301118 - 301537 | 14620.2 |
| hypothetical protein | TZ53_RS01500 | Not Available | Negative | 301724 - 301951 | 6879.75 |
| arsr/smtb family transcription factor | TZ53_RS01505 | Not Available | Positive | 302166 - 303137 | 35367.4 |
| methylenetetrahydrofolate reductase | TZ53_RS01510 | Not Available | Positive | 303134 - 304069 | 33792.2 |
| homocysteine s-methyltransferase family protein | TZ53_RS01515 | Not Available | Positive | 304066 - 305112 | 37458.7 |
| methionine synthase | TZ53_RS01520 | Not Available | Positive | 305231 - 307828 | 95092.2 |
| serine hydrolase | TZ53_RS01525 | Not Available | Negative | 307875 - 309032 | 41467.8 |
| alpha/beta fold hydrolase | TZ53_RS01530 | Not Available | Positive | 309479 - 310315 | 28763.5 |
| l-aspartate oxidase | TZ53_RS01535 | Not Available | Negative | 310435 - 312039 | 58684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
