Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | TZ53_RS01240 | Not Available | Negative | 248916 - 249698 | 26710.4 |
| nitrate reductase | TZ53_RS01245 | Not Available | Negative | 249685 - 252306 | 94407.8 |
| nitrite reductase small subunit nird | TZ53_RS01250 | Not Available | Negative | 252387 - 252722 | 11859.2 |
| nitrite reductase large subunit nirb | TZ53_RS01255 | Not Available | Negative | 252728 - 255259 | 90953.3 |
| nitrate/nitrite transporter | TZ53_RS01260 | Not Available | Negative | 255557 - 256813 | 43363.9 |
| abc transporter substrate-binding protein | TZ53_RS01265 | Not Available | Negative | 257040 - 258242 | 43703.6 |
| antar domain-containing response regulator | TZ53_RS01270 | Not Available | Negative | 258242 - 258820 | 20911.4 |
| abc-f family atp-binding cassette domain-containing protein | TZ53_RS01275 | Not Available | Positive | 259008 - 260585 | 55577.8 |
| dha2 family efflux mfs transporter permease subunit | TZ53_RS01280 | Not Available | Negative | 260595 - 262124 | 55283.8 |
| emra/emrk family multidrug efflux transporter periplasmic adaptor subunit | TZ53_RS01285 | Not Available | Negative | 262136 - 263299 | 40941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
