Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | TZ53_RS01140 | Not Available | Negative | 230287 - 231225 | 32880.6 |
| abc transporter substrate-binding protein | TZ53_RS01145 | Not Available | Positive | 231487 - 232941 | 52066.9 |
| duf4112 domain-containing protein | TZ53_RS01150 | Not Available | Positive | 232974 - 233396 | 15679.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | TZ53_RS01155 | Not Available | Negative | 233472 - 234320 | 29409.3 |
| hypothetical protein | TZ53_RS01160 | Not Available | Negative | 234317 - 234502 | 7330.99 |
| quinolinate synthase nada | TZ53_RS01165 | Not Available | Negative | 234502 - 235488 | 35896.5 |
| duf4230 domain-containing protein | TZ53_RS01170 | Not Available | Negative | 235530 - 236249 | 25991.9 |
| mbl fold metallo-hydrolase | TZ53_RS01175 | Not Available | Negative | 236234 - 237112 | 30988.7 |
| tyrosine recombinase xerc | TZ53_RS01180 | Not Available | Positive | 237178 - 238074 | 32434.5 |
| deda family protein | TZ53_RS01185 | Not Available | Negative | 238132 - 238731 | 22643.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
