Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | TZ53_RS01040 | Not Available | Negative | 211970 - 213697 | 62521.3 |
| hypothetical protein | TZ53_RS01045 | Not Available | Negative | 213817 - 214425 | 21253.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | TZ53_RS01050 | Not Available | Positive | 214580 - 215527 | 34104.8 |
| homoserine kinase | TZ53_RS01055 | Not Available | Positive | 215532 - 216509 | 35581.3 |
| ribonuclease hi | TZ53_RS01060 | Not Available | Positive | 216506 - 216952 | 16595.8 |
| cap domain-containing protein | TZ53_RS01065 | Not Available | Negative | 217011 - 217646 | 23216.6 |
| radical sam family heme chaperone hemw | TZ53_RS01070 | Not Available | Positive | 217645 - 218820 | 42513.4 |
| m56 family metallopeptidase | TZ53_RS01075 | Not Available | Negative | 218983 - 220494 | 53886.6 |
| blai/meci/copy family transcriptional regulator | TZ53_RS01080 | Not Available | Negative | 220491 - 220859 | 13486.2 |
| grx4 family monothiol glutaredoxin | TZ53_RS01085 | Not Available | Negative | 221339 - 221671 | 11982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
