Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | TZ53_RS00940 | Not Available | Negative | 193437 - 194762 | 46255.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | TZ53_RS00945 | Not Available | Negative | 194768 - 195841 | 38486.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | TZ53_RS00950 | Not Available | Negative | 195841 - 197217 | 47510.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | TZ53_RS00955 | Not Available | Negative | 197214 - 198656 | 50373.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | TZ53_RS00960 | Not Available | Negative | 198656 - 200356 | 61297.2 |
| hypothetical protein | TZ53_RS00965 | Not Available | Negative | 200357 - 201010 | 23733.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | TZ53_RS00970 | Not Available | Negative | 201007 - 201987 | 35521.1 |
| division/cell wall cluster transcriptional repressor mraz | TZ53_RS00975 | Not Available | Negative | 201984 - 202481 | 18741.2 |
| hypothetical protein | TZ53_RS00980 | Not Available | Negative | 202667 - 203941 | 45483.1 |
| hypothetical protein | TZ53_RS00985 | Not Available | Negative | 203985 - 204290 | 10721.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
