Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine palmitoyltransferase | TZ53_RS00840 | Not Available | Positive | 170325 - 171548 | 43763.7 |
| atp-binding protein | TZ53_RS00845 | Not Available | Positive | 171671 - 173662 | 72742.9 |
| hypothetical protein | TZ53_RS00850 | Not Available | Negative | 173619 - 174500 | 32307.0 |
| duf938 domain-containing protein | TZ53_RS00855 | Not Available | Negative | 174541 - 175185 | 22955.3 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | TZ53_RS00860 | Not Available | Negative | 175182 - 176753 | 55521.5 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | TZ53_RS00865 | Not Available | Negative | 176750 - 178108 | 48034.8 |
| glycine cleavage system protein gcvh | TZ53_RS00870 | Not Available | Negative | 178229 - 178600 | 13446.3 |
| glycine cleavage system aminomethyltransferase gcvt | TZ53_RS00875 | Not Available | Negative | 178626 - 179777 | 41271.6 |
| hypothetical protein | TZ53_RS00880 | Not Available | Negative | 180122 - 180412 | 10641.8 |
| deoxyguanosinetriphosphate triphosphohydrolase | TZ53_RS00885 | Not Available | Negative | 180481 - 181638 | 42986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
