Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | TZ53_RS00570 | Not Available | Negative | 120050 - 123277 | 119762.0 |
| hypothetical protein | TZ53_RS26550 | Not Available | Negative | 123350 - 123868 | 19985.7 |
| giy-yig nuclease family protein | TZ53_RS26555 | Not Available | Negative | 123872 - 124375 | 19072.4 |
| phage exclusion protein lit family protein | TZ53_RS00585 | Not Available | Negative | 124390 - 125313 | 33156.6 |
| hypothetical protein | TZ53_RS00590 | Not Available | Negative | 125612 - 126766 | 43572.5 |
| hypothetical protein | TZ53_RS26560 | Not Available | Negative | 126763 - 127119 | 13615.7 |
| hypothetical protein | TZ53_RS00595 | Not Available | Positive | 127820 - 128098 | 10408.3 |
| 3'-5' exonuclease | TZ53_RS00600 | Not Available | Negative | 128137 - 129012 | 32429.7 |
| res family nad+ phosphorylase | TZ53_RS00605 | Not Available | Negative | 129009 - 129734 | 26445.2 |
| antitoxin xre-like helix-turn-helix domain-containing protein | TZ53_RS00610 | Not Available | Negative | 129728 - 130141 | 15384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
