Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | TZ53_RS00470 | Not Available | Positive | 92945 - 93343 | 15149.0 |
| lysr family transcriptional regulator | TZ53_RS00475 | Not Available | Negative | 93311 - 94303 | 37096.8 |
| acetyl-coa acetyltransferase | TZ53_RS00480 | Not Available | Negative | 94556 - 95719 | 40446.2 |
| tonb-dependent receptor | TZ53_RS00485 | Not Available | Negative | 95827 - 98058 | 79852.5 |
| alpha/beta fold hydrolase | TZ53_RS00490 | Not Available | Negative | 98257 - 99075 | 29622.0 |
| fad-dependent monooxygenase | TZ53_RS00495 | Not Available | Negative | 99110 - 100747 | 60808.2 |
| voc family protein | TZ53_RS00500 | Not Available | Positive | 100996 - 101601 | 22494.6 |
| lysr substrate-binding domain-containing protein | TZ53_RS00505 | Not Available | Negative | 101671 - 102636 | 35745.6 |
| 3-keto-5-aminohexanoate cleavage protein | TZ53_RS00510 | Not Available | Positive | 103009 - 103941 | 34228.1 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS00515 | Not Available | Positive | 104018 - 104797 | 26727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
