Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | TZ53_RS00420 | Not Available | Negative | 79027 - 80211 | 40657.1 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | TZ53_RS00425 | Not Available | Negative | 80322 - 81617 | 45112.1 |
| transketolase | TZ53_RS00430 | Not Available | Negative | 81619 - 83958 | 84786.8 |
| 3-keto-5-aminohexanoate cleavage protein | TZ53_RS00435 | Not Available | Negative | 84045 - 84971 | 33903.0 |
| voc family protein | TZ53_RS00440 | Not Available | Positive | 85363 - 85956 | 22575.6 |
| tonb-dependent receptor | TZ53_RS00445 | Not Available | Positive | 86217 - 88634 | 86355.6 |
| amidohydrolase family protein | TZ53_RS00450 | Not Available | Positive | 88790 - 90232 | 51098.2 |
| nuclear transport factor 2 family protein | TZ53_RS00455 | Not Available | Positive | 90300 - 90680 | 14134.5 |
| zinc-dependent alcohol dehydrogenase family protein | TZ53_RS00460 | Not Available | Negative | 90723 - 91757 | 35802.2 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS00465 | Not Available | Negative | 91822 - 92583 | 26530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
