Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | TZ53_RS00320 | Not Available | Positive | 63055 - 64224 | 41698.6 |
| srpbcc domain-containing protein | TZ53_RS00325 | Not Available | Negative | 64493 - 64960 | 17278.4 |
| voc family protein | TZ53_RS00330 | Not Available | Negative | 64957 - 65448 | 18112.5 |
| voc family protein | TZ53_RS00335 | Not Available | Negative | 65460 - 66263 | 27938.1 |
| duf1428 domain-containing protein | TZ53_RS00340 | Not Available | Negative | 66302 - 66664 | 13510.0 |
| voc family protein | TZ53_RS00345 | Not Available | Negative | 66693 - 67133 | 15919.8 |
| winged helix-turn-helix transcriptional regulator | TZ53_RS00350 | Not Available | Positive | 67259 - 67930 | 24399.4 |
| sdr family oxidoreductase | TZ53_RS00355 | Not Available | Negative | 67979 - 68719 | 25952.6 |
| winged helix-turn-helix transcriptional regulator | TZ53_RS00360 | Not Available | Positive | 68819 - 69253 | 16493.8 |
| hypothetical protein | TZ53_RS00365 | Not Available | Negative | 69258 - 70097 | 29994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
