Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | TZ53_RS00270 | Not Available | Positive | 50891 - 51685 | 27887.4 |
| hypothetical protein | TZ53_RS00275 | Not Available | Positive | 51845 - 52399 | 19353.9 |
| amidohydrolase | TZ53_RS00280 | Not Available | Positive | 52542 - 53903 | 48355.2 |
| atp-dependent zinc metalloprotease ftsh | TZ53_RS00285 | Not Available | Negative | 54039 - 55988 | 70485.8 |
| hypothetical protein | TZ53_RS00290 | Not Available | Negative | 56056 - 56247 | 6803.53 |
| trna lysidine(34) synthetase tils | TZ53_RS00295 | Not Available | Negative | 56376 - 57320 | 33295.0 |
| tetratricopeptide repeat protein | TZ53_RS00300 | Not Available | Negative | 57328 - 58239 | 31954.8 |
| helix-turn-helix domain-containing protein | TZ53_RS00305 | Not Available | Negative | 58340 - 59242 | 30960.7 |
| phosphoenolpyruvate--protein phosphotransferase | TZ53_RS00310 | Not Available | Negative | 59345 - 61621 | 84690.5 |
| pyridoxal phosphate-dependent aminotransferase | TZ53_RS00315 | Not Available | Positive | 61773 - 62930 | 41413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
