Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster insertion protein erpa | TZ53_RS00225 | Not Available | Negative | 42723 - 43049 | 10994.1 |
| m23 family metallopeptidase | TZ53_RS00230 | Not Available | Negative | 43127 - 43849 | 25042.7 |
| ferritin-like domain-containing protein | TZ53_RS00235 | Not Available | Negative | 43959 - 44768 | 29850.4 |
| thioredoxin-dependent thiol peroxidase | TZ53_RS00240 | Not Available | Negative | 44765 - 45226 | 16433.8 |
| bifunctional | TZ53_RS00245 | Not Available | Negative | 45229 - 47916 | 97700.2 |
| hypothetical protein | TZ53_RS00250 | Not Available | Positive | 47999 - 48190 | 7018.52 |
| hypothetical protein | TZ53_RS00255 | Not Available | Positive | 48346 - 48678 | 10893.0 |
| neutral zinc metallopeptidase | TZ53_RS00260 | Not Available | Negative | 48688 - 49557 | 31233.0 |
| patatin-like phospholipase family protein | TZ53_RS00265 | Not Available | Positive | 49716 - 50894 | 43365.8 |
| Tmrna,resume consensus sequence (at 566): gacattcgcgccttcccc | Not Available | Not Available | Positive | 50868 - 51560 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
