Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | TZ53_RS21075 | Not Available | Negative | 4558628 - 4559758 | 39485.7 |
| hypothetical protein | TZ53_RS21080 | Not Available | Negative | 4559873 - 4560211 | 10984.3 |
| Terminase large subunit | TZ53_RS21085 | Not Available | Negative | 4560373 - 4561698 | 46447.8 |
| Hypothetical protein | TZ53_RS21090 | Not Available | Positive | 4561764 - 4562210 | 16286.3 |
| Diguanylate cyclase | TZ53_RS21095 | Not Available | Negative | 4562300 - 4563505 | 44813.9 |
| Arac family transcriptional regulator | TZ53_RS21100 | Not Available | Negative | 4563447 - 4564316 | 32198.3 |
| Transposase | TZ53_RS21105 | Not Available | Positive | 4564438 - 4565661 | 45854.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | TZ53_RS00010 | Not Available | Positive | 486 - 1493 | 36557.2 |
| family 43 glycosylhydrolase | TZ53_RS00015 | Not Available | Positive | 1613 - 3034 | 52126.8 |
| tonb-dependent receptor | TZ53_RS00020 | Not Available | Positive | 3283 - 6108 | 102209.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
