Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail assembly chaperone | TZ53_RS21025 | Not Available | Negative | 4554124 - 4554321 | 7273.6 |
| gene transfer agent family protein | TZ53_RS21030 | Not Available | Negative | 4554318 - 4554644 | 10870.3 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | TZ53_RS21035 | Not Available | Negative | 4554641 - 4555048 | 14045.5 |
| hypothetical protein | TZ53_RS21040 | Not Available | Positive | 4555107 - 4555436 | 11612.6 |
| duf3168 domain-containing protein | TZ53_RS21045 | Not Available | Negative | 4555433 - 4555828 | 13590.5 |
| hypothetical protein | TZ53_RS21050 | Not Available | Negative | 4555825 - 4556028 | 7240.89 |
| phage head-tail connector protein | TZ53_RS21055 | Not Available | Negative | 4556048 - 4556533 | 17198.5 |
| Putative major capsid protein | TZ53_RS21060 | Not Available | Negative | 4556658 - 4557770 | 38678.7 |
| Putative prohead protease | TZ53_RS21065 | Not Available | Negative | 4557899 - 4558291 | 13966.8 |
| Hypothetical protein | TZ53_RS21070 | Not Available | Negative | 4558284 - 4558604 | 11294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
