Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative portal protein | TZ53_RS13300 | Not Available | Positive | 2885653 - 2887161 | 55571.6 |
| Putative major head protein | TZ53_RS13305 | Not Available | Positive | 2887158 - 2889317 | 76684.1 |
| Bacteriophage virulence determinant | TZ53_RS20985 | Not Available | Negative | 4545072 - 4545620 | 17697.9 |
| ompa family protein | TZ53_RS20990 | Not Available | Negative | 4545984 - 4547060 | 37318.6 |
| Hypothetical protein | TZ53_RS20995 | Not Available | Negative | 4547251 - 4547754 | 17338.5 |
| Gene transfer agent host specificity protein | TZ53_RS21000 | Not Available | Negative | 4547788 - 4549983 | 75311.8 |
| Hypothetical protein | TZ53_RS21005 | Not Available | Negative | 4549992 - 4550351 | 12679.5 |
| Minor tail protein | TZ53_RS21010 | Not Available | Negative | 4550360 - 4551178 | 28107.5 |
| Capsid protein | TZ53_RS21015 | Not Available | Negative | 4551175 - 4553502 | 83849.0 |
| Putative tail protein | TZ53_RS21020 | Not Available | Negative | 4553499 - 4554041 | 18386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
