Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | TZ53_RS13525 | Not Available | Negative | 2924192 - 2925871 | 60678.3 |
| smr/muts family protein | TZ53_RS13530 | Not Available | Negative | 2925967 - 2926500 | 18908.6 |
| murein transglycosylase a | TZ53_RS13535 | Not Available | Negative | 2926513 - 2927769 | 43461.8 |
| tim44/tima family putative adaptor protein | TZ53_RS13540 | Not Available | Negative | 2927766 - 2928422 | 23856.4 |
| protein-export chaperone secb | TZ53_RS13545 | Not Available | Positive | 2928611 - 2929108 | 17823.1 |
| murein biosynthesis integral membrane protein murj | TZ53_RS13550 | Not Available | Positive | 2929230 - 2930819 | 56183.8 |
| tryptophan--trna ligase | TZ53_RS13555 | Not Available | Positive | 2930824 - 2931828 | 36528.0 |
| duf4136 domain-containing protein | TZ53_RS13560 | Not Available | Positive | 2932027 - 2932677 | 23534.9 |
| hypothetical protein | TZ53_RS13565 | Not Available | Negative | 2932832 - 2933317 | 18731.5 |
| copper chaperone pcu(a)c | TZ53_RS13570 | Not Available | Negative | 2933314 - 2933784 | 16622.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
