Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incp plasmid survival protein kfrc family protein | TZ53_RS22330 | Not Available | Positive | 24774 - 25406 | 23663.8 |
| hypothetical protein | TZ53_RS22335 | Not Available | Negative | 25441 - 25881 | 15551.7 |
| arsa-related p-loop atpase | TZ53_RS22340 | Not Available | Negative | 25881 - 26606 | 25992.3 |
| Lysr family transcriptional regulator | TZ53_RS10890 | Not Available | Positive | 2395247 - 2396128 | 32101.8 |
| Hypothetical protein | TZ53_RS10895 | Not Available | Negative | 2396442 - 2396711 | 9868.22 |
| Hypothetical protein | TZ53_RS10900 | Not Available | Negative | 2396721 - 2397260 | 19100.8 |
| Integrase | TZ53_RS10905 | Not Available | Positive | 2397670 - 2398884 | 46161.5 |
| Gp49 | TZ53_RS10910 | Not Available | Positive | 2399010 - 2399285 | 9911.13 |
| helix-turn-helix domain-containing protein | TZ53_RS10915 | Not Available | Positive | 2399278 - 2399619 | 12611.1 |
| Putative ardc-like antirestriction protein | TZ53_RS10920 | Not Available | Negative | 2399720 - 2400001 | 10220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
