Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | TZ53_RS13480 | Not Available | Negative | 2915531 - 2916262 | 27527.0 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | TZ53_RS13485 | Not Available | Positive | 2916388 - 2917200 | 29346.5 |
| 30s ribosomal protein s20 | TZ53_RS13490 | Not Available | Positive | 2917320 - 2917583 | 9386.58 |
| chromosomal replication initiator protein dnaa | TZ53_RS13495 | Not Available | Positive | 2918026 - 2919441 | 51588.1 |
| peptidylprolyl isomerase | TZ53_RS13500 | Not Available | Positive | 2919618 - 2920226 | 21055.5 |
| hypothetical protein | TZ53_RS27170 | Not Available | Positive | 2920502 - 2920678 | 6576.77 |
| hypothetical protein | TZ53_RS13505 | Not Available | Positive | 2920717 - 2921070 | 13073.7 |
| ld-carboxypeptidase | TZ53_RS13510 | Not Available | Negative | 2921221 - 2922228 | 35369.7 |
| cupin domain-containing protein | TZ53_RS13515 | Not Available | Negative | 2922249 - 2922692 | 16090.8 |
| succinyl-diaminopimelate desuccinylase | TZ53_RS13520 | Not Available | Positive | 2922874 - 2924016 | 40203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
