Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | TZ53_RS13035 | Not Available | Negative | 2848233 - 2848670 | 15127.9 |
| hypothetical protein | TZ53_RS13040 | Not Available | Negative | 2848744 - 2848971 | 8239.66 |
| dna-3-methyladenine glycosylase family protein | TZ53_RS13045 | Not Available | Negative | 2848972 - 2849589 | 22327.8 |
| 2fe-2s iron-sulfur cluster-binding protein | TZ53_RS13050 | Not Available | Positive | 2849666 - 2849983 | 11348.2 |
| zinc-binding dehydrogenase | TZ53_RS13055 | Not Available | Negative | 2850276 - 2851391 | 39504.3 |
| peptide-methionine (s)-s-oxide reductase msra | TZ53_RS13060 | Not Available | Negative | 2851405 - 2852076 | 24439.0 |
| hypothetical protein | TZ53_RS27165 | Not Available | Negative | 2852063 - 2852224 | 5352.57 |
| pyridoxal phosphate-dependent aminotransferase | TZ53_RS13070 | Not Available | Negative | 2852542 - 2853744 | 42732.9 |
| aminotransferase class iv | TZ53_RS27565 | Not Available | Negative | 2854028 - 2854651 | 23271.1 |
| aminodeoxychorismate synthase component i | TZ53_RS27570 | Not Available | Negative | 2854697 - 2855872 | 42568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
