Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | TZ53_RS12985 | Not Available | Positive | 2838325 - 2840322 | 74950.1 |
| translation initiation factor if-3 | TZ53_RS12990 | Not Available | Positive | 2840450 - 2840983 | 20459.0 |
| ggdef domain-containing protein | TZ53_RS12995 | Not Available | Negative | 2841056 - 2841931 | 31568.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | TZ53_RS13000 | Not Available | Negative | 2842049 - 2842618 | 19916.7 |
| twin transmembrane helix small protein | TZ53_RS13005 | Not Available | Negative | 2842633 - 2842866 | 8238.66 |
| trna glutamyl-q(34) synthetase gluqrs | TZ53_RS13010 | Not Available | Negative | 2842876 - 2843751 | 31568.9 |
| hnh endonuclease | TZ53_RS13015 | Not Available | Positive | 2843876 - 2844442 | 21811.0 |
| crp/fnr family transcriptional regulator | TZ53_RS13020 | Not Available | Negative | 2844546 - 2845283 | 27702.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | TZ53_RS13025 | Not Available | Positive | 2845489 - 2846772 | 44912.6 |
| sensor histidine kinase | TZ53_RS13030 | Not Available | Positive | 2846765 - 2848288 | 56464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
