Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | TZ53_RS12855 | Not Available | Positive | 2808085 - 2809044 | 34191.9 |
| penicillin-binding protein 1a | TZ53_RS12860 | Not Available | Positive | 2809191 - 2811728 | 93404.8 |
| alanine dehydrogenase | TZ53_RS12865 | Not Available | Negative | 2811914 - 2813029 | 38793.9 |
| peptidylprolyl isomerase | TZ53_RS12870 | Not Available | Negative | 2813120 - 2814049 | 33443.2 |
| Trna-ser | Not Available | Not Available | Positive | 2814102 - 2814192 | Not Available |
| phosphatase pap2 family protein | TZ53_RS26810 | Not Available | Positive | 2814375 - 2814509 | 4645.67 |
| hypothetical protein | TZ53_RS27780 | Not Available | Positive | 2814638 - 2814760 | 4280.25 |
| glycoside hydrolase family 43 protein | TZ53_RS12885 | Not Available | Negative | 2814859 - 2816244 | 51116.3 |
| glycoside hydrolase family 127 protein | TZ53_RS12890 | Not Available | Negative | 2816587 - 2818899 | 84890.9 |
| alpha-n-arabinofuranosidase | TZ53_RS12895 | Not Available | Negative | 2819401 - 2820927 | 55583.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
