Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase family protein | TZ53_RS12800 | Not Available | Positive | 2797738 - 2798292 | 20530.9 |
| gfa family protein | TZ53_RS12805 | Not Available | Negative | 2798328 - 2798750 | 15264.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | TZ53_RS12810 | Not Available | Negative | 2798761 - 2799408 | 23714.7 |
| membrane protein insertase yidc | TZ53_RS12815 | Not Available | Negative | 2799419 - 2801122 | 62756.6 |
| membrane protein insertion efficiency factor yidd | TZ53_RS12820 | Not Available | Negative | 2801156 - 2801368 | 7811.67 |
| ribonuclease p protein component | TZ53_RS12825 | Not Available | Negative | 2801365 - 2801847 | 17640.5 |
| 50s ribosomal protein l34 | TZ53_RS12830 | Not Available | Negative | 2801880 - 2802014 | 5122.37 |
| dsba family protein | TZ53_RS12835 | Not Available | Negative | 2802335 - 2803105 | 27075.5 |
| m48 family metalloprotease | TZ53_RS12840 | Not Available | Negative | 2803102 - 2804454 | 48671.3 |
| ribonuclease e/g | TZ53_RS12845 | Not Available | Negative | 2804897 - 2807593 | 99414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
