Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr04063 family pep-cterm/xrta system glycosyltransferase | TZ53_RS12750 | Not Available | Positive | 2789733 - 2790959 | 44744.7 |
| hypothetical protein | TZ53_RS12755 | Not Available | Positive | 2790965 - 2791822 | 29780.0 |
| hypothetical protein | TZ53_RS12760 | Not Available | Negative | 2791869 - 2792237 | 13291.9 |
| hypothetical protein | TZ53_RS12765 | Not Available | Negative | 2792234 - 2792419 | 7468.21 |
| helix-turn-helix transcriptional regulator | TZ53_RS12770 | Not Available | Positive | 2792533 - 2793204 | 24755.0 |
| xdhc family protein | TZ53_RS12775 | Not Available | Positive | 2793316 - 2794233 | 31831.8 |
| ybdd/yjix family protein | TZ53_RS12780 | Not Available | Negative | 2794437 - 2794622 | 7279.87 |
| carbon starvation csta family protein | TZ53_RS12785 | Not Available | Negative | 2794619 - 2796667 | 71916.2 |
| doxx family protein | TZ53_RS12790 | Not Available | Negative | 2796720 - 2797178 | 16453.2 |
| pyridoxamine 5'-phosphate oxidase family protein | TZ53_RS12795 | Not Available | Negative | 2797175 - 2797612 | 16333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
