Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | TZ53_RS12600 | Not Available | Positive | 2758865 - 2759458 | 21740.6 |
| anti-sigma factor family protein | TZ53_RS12605 | Not Available | Negative | 2759551 - 2760285 | 27207.4 |
| sigma-70 family rna polymerase sigma factor | TZ53_RS12610 | Not Available | Negative | 2760278 - 2760808 | 19914.7 |
| glycosyltransferase family 4 protein | TZ53_RS12615 | Not Available | Negative | 2760810 - 2762018 | 43192.2 |
| acvb/virj family lysyl-phosphatidylglycerol hydrolase | TZ53_RS12620 | Not Available | Positive | 2762213 - 2763007 | 27780.7 |
| duf2147 domain-containing protein | TZ53_RS12625 | Not Available | Positive | 2763051 - 2763482 | 15425.7 |
| virulence factor family protein | TZ53_RS12630 | Not Available | Positive | 2763479 - 2764894 | 49947.9 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | TZ53_RS12635 | Not Available | Positive | 2764891 - 2767551 | 95631.5 |
| merc domain-containing protein | TZ53_RS12640 | Not Available | Positive | 2767744 - 2768121 | 12724.9 |
| class ii fructose-bisphosphatase | TZ53_RS12645 | Not Available | Negative | 2768194 - 2769177 | 34424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
