Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1993 family protein | TZ53_RS12555 | Not Available | Positive | 2744506 - 2745117 | 21985.6 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | TZ53_RS12560 | Not Available | Negative | 2745178 - 2747568 | 85948.3 |
| glycosyltransferase | TZ53_RS12565 | Not Available | Negative | 2747725 - 2749671 | 71186.3 |
| hlyd family secretion protein | TZ53_RS12570 | Not Available | Negative | 2749679 - 2750902 | 43490.2 |
| laci family dna-binding transcriptional regulator | TZ53_RS12575 | Not Available | Negative | 2750943 - 2751971 | 36423.8 |
| sensor histidine kinase | TZ53_RS12580 | Not Available | Negative | 2752280 - 2753572 | 45873.4 |
| response regulator transcription factor | TZ53_RS12585 | Not Available | Negative | 2753844 - 2754530 | 25105.5 |
| pdz domain-containing protein | TZ53_RS12590 | Not Available | Negative | 2754527 - 2754970 | 15567.0 |
| glycosyltransferase | TZ53_RS12595 | Not Available | Negative | 2755000 - 2758317 | 120200.0 |
| hypothetical protein | TZ53_RS26805 | Not Available | Positive | 2758631 - 2758792 | 5773.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
