Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | TZ53_RS12405 | Not Available | Positive | 2705163 - 2706695 | 57421.4 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | TZ53_RS12410 | Not Available | Positive | 2707025 - 2707459 | 15567.8 |
| res family nad+ phosphorylase | TZ53_RS12415 | Not Available | Positive | 2707456 - 2707941 | 18142.7 |
| is5 family transposase | TZ53_RS12420 | Not Available | Negative | 2708311 - 2709393 | 40156.6 |
| hypothetical protein | TZ53_RS27370 | Not Available | Positive | 2709602 - 2710534 | 33047.2 |
| endonuclease domain-containing protein | TZ53_RS12425 | Not Available | Positive | 2710948 - 2711553 | 22547.1 |
| is5 family transposase | TZ53_RS12430 | Not Available | Positive | 2711839 - 2712921 | 40156.6 |
| is1182 family transposase | TZ53_RS12435 | Not Available | Positive | 2713031 - 2714389 | 51062.3 |
| hypothetical protein | TZ53_RS12440 | Not Available | Positive | 2714685 - 2715248 | 21174.1 |
| hypothetical protein | TZ53_RS26130 | Not Available | Negative | 2715245 - 2715682 | 16256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
