Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi/virb10 family protein | TZ53_RS22230 | Not Available | Negative | 6340 - 7689 | 45994.6 |
| spor domain-containing protein | TZ53_RS22235 | Not Available | Negative | 7720 - 8493 | 26896.9 |
| p-type conjugative transfer protein trbg | TZ53_RS22240 | Not Available | Negative | 8496 - 9479 | 35352.9 |
| virb8/trbf family protein | TZ53_RS22245 | Not Available | Negative | 9497 - 10216 | 26275.5 |
| hypothetical protein | TZ53_RS27390 | Not Available | Negative | 10203 - 10388 | 6477.67 |
| tn3 family transposase | TZ53_RS22255 | Not Available | Positive | 10560 - 13469 | 109154.0 |
| recombinase family protein | TZ53_RS22260 | Not Available | Positive | 13612 - 14478 | 32295.8 |
| virb4 family type iv secretion/conjugal transfer atpase | TZ53_RS22265 | Not Available | Negative | 14485 - 16896 | 89148.8 |
| conjugal transfer protein trbd | TZ53_RS22270 | Not Available | Negative | 16893 - 17225 | 12740.0 |
| trbc/virb2 family protein | TZ53_RS22275 | Not Available | Negative | 17244 - 17624 | 12956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
