Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid mobilization protein | TZ53_RS12205 | Not Available | Positive | 2651890 - 2652213 | 12156.6 |
| relaxase/mobilization nuclease domain-containing protein | TZ53_RS12210 | Not Available | Positive | 2652210 - 2653706 | 57411.9 |
| aaa family atpase | TZ53_RS27365 | Not Available | Positive | 2653895 - 2657605 | 139537.0 |
| mcrc family protein | TZ53_RS12225 | Not Available | Positive | 2657602 - 2658933 | 48965.0 |
| sacsin n-terminal atp-binding-like domain-containing protein | TZ53_RS12230 | Not Available | Positive | 2659483 - 2666718 | 265346.0 |
| dead/deah box helicase | TZ53_RS12235 | Not Available | Positive | 2666711 - 2669392 | 98825.5 |
| aaa family atpase | TZ53_RS12240 | Not Available | Negative | 2669573 - 2673280 | 133247.0 |
| exonuclease sbccd subunit d c-terminal domain-containing protein | TZ53_RS12245 | Not Available | Negative | 2673280 - 2674512 | 44245.8 |
| duf2779 domain-containing protein | TZ53_RS27150 | Not Available | Negative | 2674584 - 2676071 | 54122.4 |
| helix-turn-helix transcriptional regulator | TZ53_RS12255 | Not Available | Negative | 2676137 - 2677177 | 39363.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
