Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | TZ53_RS12120 | Not Available | Positive | 2632774 - 2635575 | 103097.0 |
| opt family oligopeptide transporter | TZ53_RS12125 | Not Available | Negative | 2635662 - 2637629 | 66653.4 |
| gdsl-type esterase/lipase family protein | TZ53_RS12130 | Not Available | Negative | 2637720 - 2638496 | 27646.4 |
| heat shock protein hspq | TZ53_RS12135 | Not Available | Negative | 2638453 - 2638824 | 14010.4 |
| Trna-ser | Not Available | Not Available | Positive | 2638947 - 2639036 | Not Available |
| tyrosine-type recombinase/integrase | TZ53_RS12145 | Not Available | Positive | 2639190 - 2640512 | 49683.4 |
| hypothetical protein | TZ53_RS12150 | Not Available | Negative | 2640452 - 2640922 | 18069.9 |
| duf6471 domain-containing protein | TZ53_RS27360 | Not Available | Positive | 2641241 - 2641585 | 12281.8 |
| restriction endonuclease subunit m | TZ53_RS12160 | Not Available | Positive | 2641582 - 2642229 | 24770.6 |
| eco57i restriction-modification methylase domain-containing protein | TZ53_RS12165 | Not Available | Positive | 2642222 - 2643766 | 57945.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
