Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| torf family putative porin | TZ53_RS12070 | Not Available | Negative | 2620642 - 2621400 | 26284.5 |
| mechanosensitive ion channel family protein | TZ53_RS12075 | Not Available | Negative | 2621652 - 2622911 | 44914.0 |
| cystathionine beta-lyase | TZ53_RS12080 | Not Available | Negative | 2622908 - 2624131 | 44037.6 |
| sulfurtransferase | TZ53_RS12085 | Not Available | Negative | 2624128 - 2624976 | 30116.7 |
| hypothetical protein | TZ53_RS12090 | Not Available | Negative | 2625072 - 2626271 | 42174.1 |
| preq(1) synthase | TZ53_RS12095 | Not Available | Positive | 2626373 - 2626831 | 16749.1 |
| giy-yig nuclease family protein | TZ53_RS12100 | Not Available | Positive | 2626912 - 2627175 | 10205.3 |
| m1 family metallopeptidase | TZ53_RS12105 | Not Available | Positive | 2627364 - 2630021 | 94237.8 |
| acetyl-coa hydrolase/transferase family protein | TZ53_RS12110 | Not Available | Negative | 2630090 - 2631406 | 46622.3 |
| phytase | TZ53_RS12115 | Not Available | Negative | 2631520 - 2632593 | 36944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
