Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | TZ53_RS11975 | Not Available | Negative | 2605106 - 2605687 | 20775.2 |
| cytochrome c oxidase subunit ii | TZ53_RS11980 | Not Available | Positive | 2605929 - 2606942 | 35457.3 |
| cytochrome c oxidase subunit i | TZ53_RS11985 | Not Available | Positive | 2606961 - 2608628 | 61030.9 |
| heme o synthase | TZ53_RS11990 | Not Available | Positive | 2608746 - 2609666 | 33146.4 |
| hypothetical protein | TZ53_RS27770 | Not Available | Positive | 2609663 - 2609794 | 4641.81 |
| cytochrome c oxidase assembly protein | TZ53_RS11995 | Not Available | Positive | 2609794 - 2610369 | 21299.6 |
| cytochrome c oxidase subunit 3 | TZ53_RS12000 | Not Available | Positive | 2610406 - 2611236 | 30718.5 |
| duf983 domain-containing protein | TZ53_RS12005 | Not Available | Positive | 2611321 - 2611719 | 13987.5 |
| surf1 family protein | TZ53_RS12010 | Not Available | Positive | 2611716 - 2612342 | 22436.7 |
| threonine synthase | TZ53_RS12015 | Not Available | Positive | 2612386 - 2613786 | 49919.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
