Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TZ53_RS11925 | Not Available | Negative | 2596189 - 2596539 | 12759.0 |
| putative dna modification/repair radical sam protein | TZ53_RS11930 | Not Available | Negative | 2596615 - 2597862 | 46636.9 |
| chase3 domain-containing protein | TZ53_RS11935 | Not Available | Negative | 2597913 - 2599781 | 68174.7 |
| class ii aldolase/adducin family protein | TZ53_RS11940 | Not Available | Negative | 2599926 - 2600696 | 28448.1 |
| 30s ribosomal protein s21 | TZ53_RS11945 | Not Available | Positive | 2600920 - 2601126 | 8257.16 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | TZ53_RS11950 | Not Available | Positive | 2601215 - 2601778 | 19478.6 |
| ai-2e family transporter | TZ53_RS11955 | Not Available | Negative | 2601939 - 2603021 | 38457.7 |
| signal peptidase i | TZ53_RS11960 | Not Available | Negative | 2603045 - 2603935 | 32397.9 |
| holo-acp synthase | TZ53_RS11965 | Not Available | Negative | 2603967 - 2604368 | 14466.5 |
| pyridoxine 5'-phosphate synthase | TZ53_RS11970 | Not Available | Negative | 2604365 - 2605102 | 26084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
