Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase family protein | TZ53_RS23495 | Not Available | Negative | 224912 - 226411 | 55144.5 |
| is6-like element is6100 family transposase | TZ53_RS22185 | Not Available | Negative | 55 - 819 | 29684.0 |
| type ii toxin-antitoxin system rele/pare family toxin | TZ53_RS22190 | Not Available | Positive | 1214 - 1588 | 13961.4 |
| helix-turn-helix domain-containing protein | TZ53_RS22195 | Not Available | Positive | 1585 - 1911 | 11793.3 |
| hypothetical protein | TZ53_RS22200 | Not Available | Positive | 1911 - 2153 | 8804.27 |
| hypothetical protein | TZ53_RS22205 | Not Available | Positive | 2146 - 2445 | 11228.3 |
| transglycosylase slt domain-containing protein | TZ53_RS22210 | Not Available | Negative | 2466 - 3578 | 39799.1 |
| p-type conjugative transfer protein trbl | TZ53_RS22215 | Not Available | Negative | 3581 - 5296 | 54661.9 |
| eexn family lipoprotein | TZ53_RS22220 | Not Available | Negative | 5307 - 5549 | 8646.29 |
| p-type conjugative transfer protein trbj | TZ53_RS22225 | Not Available | Negative | 5559 - 6314 | 26735.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
