Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | TZ53_RS11580 | Not Available | Negative | 2524954 - 2526162 | 43863.8 |
| pha/phb synthase family protein | TZ53_RS11585 | Not Available | Positive | 2526302 - 2528041 | 64262.7 |
| phasin family protein | TZ53_RS11590 | Not Available | Positive | 2528195 - 2529097 | 31354.6 |
| sulfite exporter taue/safe family protein | TZ53_RS11595 | Not Available | Positive | 2529427 - 2530257 | 27999.7 |
| hypothetical protein | TZ53_RS11600 | Not Available | Positive | 2530467 - 2530832 | 13693.1 |
| transglutaminase domain-containing protein | TZ53_RS11605 | Not Available | Negative | 2530979 - 2531869 | 31400.6 |
| circularly permuted type 2 atp-grasp protein | TZ53_RS11610 | Not Available | Negative | 2531866 - 2534337 | 88212.6 |
| duf2126 domain-containing protein | TZ53_RS11615 | Not Available | Negative | 2534334 - 2537663 | 122100.0 |
| duf488 family protein | TZ53_RS11620 | Not Available | Negative | 2537862 - 2538293 | 15270.6 |
| hypothetical protein | TZ53_RS11625 | Not Available | Negative | 2538333 - 2538596 | 10032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
