Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | TZ53_RS11530 | Not Available | Negative | 2514631 - 2514987 | 12989.6 |
| lysine--trna ligase | TZ53_RS11535 | Not Available | Positive | 2515229 - 2516809 | 58856.1 |
| rcnb family protein | TZ53_RS11540 | Not Available | Negative | 2517028 - 2517498 | 19159.8 |
| prolyl hydroxylase family protein | TZ53_RS11545 | Not Available | Negative | 2517692 - 2518369 | 24867.5 |
| rcnb family protein | TZ53_RS11550 | Not Available | Negative | 2518484 - 2519416 | 36779.8 |
| biliverdin-producing heme oxygenase | TZ53_RS11555 | Not Available | Positive | 2519643 - 2520176 | 18942.5 |
| hwe histidine kinase domain-containing protein | TZ53_RS11560 | Not Available | Positive | 2520169 - 2522736 | 92628.8 |
| doda-type extradiol aromatic ring-opening family dioxygenase | TZ53_RS11565 | Not Available | Positive | 2522831 - 2523640 | 29334.9 |
| (2fe-2s)-binding protein | TZ53_RS11570 | Not Available | Negative | 2523662 - 2524198 | 18924.7 |
| duf2721 domain-containing protein | TZ53_RS11575 | Not Available | Negative | 2524195 - 2524671 | 17159.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
